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Clinical Informatics Engineer

Employer
Regeneron Pharmaceuticals, Inc.
Location
Tarrytown, New York
Start date
Oct 4, 2022

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Discipline
Clinical, Clinical Research
Required Education
Masters Degree/MBA
Position Type
Full time
Hotbed
Pharm Country, Best Places to Work

Job Details

The Clinical Informatics Engineer will be responsible for developing and maintaining highly scalable and reliable data management pipelines, tools, and centralized databases for conducting analyses involving clinical and phenotypic data with an overarching goal of improving clinical phenotyping. You will design, test, implement, automate and maintain the ETL pipelines that facilitate approaches for extracting and analyzing large-scale phenotypic datasets, including de-identified EHR extracts from external collaborators, targeted clinical datasets in selected cohorts, and internal datasets from clinical trials and other human subject research. You will work with analysts, clinical scientists, software developers, and programmers to provide the best data management technology solutions to store, standardize, structure and mine the clinical and phenotypic data sets to support and perform various clinical research studies. This position may also focus on developing and evaluating methods to improve clinical phenotyping.

A typical day may include:

  • Develop tools and pipelines, and optimize internal data processes for extraction, curation, processing, and storage of clinical informatics data

  • Develop and automate code and production data ETL and quality assurance pipelines

  • Develop, update, and maintain standards and procedures for data and databases access, storage, versioning, and maintenance

  • Use a customer-focused approach to provide data extraction and storage solutions driven by scientific use cases.

  • Function as a "super user" of data reporting, analysis, and management tools

  • Serve as a clinical informatics data processing and management standard methodologies expert

  • Gather data management and processing requirements from diverse partners and implements the best technical solutions

  • Communicate the data management requirements and solutions to diverse customers and document work for training and replication purposes.

  • Build and maintain data standardization and optimization solutions to support the use of AL/ML for advanced phenotyping

  • Conduct data analysis, including mining and curating phenotypic datasets with primary responsibility in developing, identifying, and standardizing clinical phenotypes and cohorts of interest for "phenotype first" genomic analysis of associated samples and efficient data mining and association analysis in both phenotype first and genotype first queries.

  • Maintain close collaboration and coordination with external health system collaborators and informatics teams mining EHR and phenotypic data sets. Work with these collaborators to structure data and develop algorithms, rules engines, and querying tools to access and curate phenotypic datasets.

This role may be for you if:

  • You are interested in data mining, clinical databases, and hospital health informatics databases

  • You can multitask and manage simultaneous projects to meet deadlines with strong attention to detail.

  • Possess the ability to interpret and communicate analytical information clearly and concisely.

  • You have exceptional analytical, organizational, and quantitative problem-solving skills and a willingness to learn and acquire new skills.

  • You excel at managing relationships and projects involving diverse partners.

  • You communicate findings clearly and document work for training and replication purposes.

To be considered for this role, you must have a master’s degree or PhD in Informatics, Statistics, Computer Science, Information Science, or other relevant analytical/data field, and a minimum of 3 years of experience in data engineering and management, ETL pipelines development, automation, and management. Healthcare and EHR data analytics experience is strongly preferred. Familiarity with data mining, clinical databases, and hospital health informatics databases, including Epic or other EHR data structures. Familiarity with clinical data standards such as ICD, SNOMED, LOINC, and OMOP, database architecture and administration. Experience with HIPAA and experience with IRB protocols around the use of EHR data. Experience working with investigators. Involvement in relevant programs such as PCORnet, eMERGE, HMO Research Network or other such projects is a plus. Demonstrates understanding of relational database concepts and querying tools. Experience with CI/CD framework. Working knowledge of programming languages such as Python and R. Have experience with cloud computing services such as AWS and GCP. Experience with agile methods (Scrum, Kanban) and tools such as Atlassian JIRA and Microsoft teams foundation server. The level is commensurate with education and experience.

#RGCCI

#LI-Hybrid

Does this sound like you? Apply now to take your first steps toward living the Regeneron Way! We have an inclusive and diverse culture that provides amazing benefits including health and wellness programs, fitness centers and stock for employees at all levels!

Regeneron is an equal opportunity employer and all qualified applicants will receive consideration for employment without regard to race, color, religion or belief (or lack thereof), sex, nationality, national or ethnic origin, civil status, age, citizenship status, membership of the Traveler community, sexual orientation, disability, genetic information, familial status, marital or registered civil partnership status, pregnancy or parental status, gender identity, gender reassignment, military or veteran status, or any other protected characteristic in accordance with applicable laws and regulations. We will ensure that individuals with disabilities are provided reasonable accommodations to participate in the job application process. Please contact us to discuss any accommodations you think you may need.

Company

Regeneron is a leading biotechnology company that invents life-transforming medicines for people with serious diseases. Founded and led for 30 years by physician-scientists, our unique ability to repeatedly and consistently translate science into medicine has led to seven FDA-approved treatments and numerous product candidates in development, all of which were homegrown in our laboratories. Our medicines and pipeline are designed to help patients with eye disease, allergic and inflammatory diseases, cancer, cardiovascular and metabolic diseases, infectious diseases, pain and rare diseases.
 
Regeneron is accelerating and improving the traditional drug development process through our proprietary VelociSuite® technologies, such as VelocImmune® which produces optimized fully-human antibodies, and ambitious research initiatives such as the Regeneron Genetics Center, which is conducting one of the largest genetics sequencing efforts in the world.

Stock Symbol: REGN

Stock Exchange: NASDAQ

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Company info
Website
Phone
914-847-7000
Location
Corporate Headquarters
777 Old Saw Mill River Road
Tarrytown
New York
10591
United States

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